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Bioneer deletion libraries

Many in the community are using the Bioneer deletion sets. Inevitably with such a large resource, there will be issues or ambiguities. Have you found any errors or identified problems with the Bioneer libraries? Check the table for strains of interest, and fill in the form if you've found something worth noting. WE'll collate the data here and publish it regularly. We'll also try to provide information from Bioneer about resolution of any issues.

Bioneer Library Report
SPAC number gene name the problem Library version Reported byResolution
SPAC15E1.03 rpl42 Not deleted 2 Henry Levin
SPAC16C9.05 cph1 Not deleted 2 Henry Levin
SPAC1805.06c hem2 Not deleted 2 Henry Levin
SPAC186.03 Not deleted 2 Henry Levin
SPAC18G6.02c chp1 Could not be revived Henry Levin Replaced by Bioneer
SPAC1F7.01c spt6 Not deleted 2 Henry Levin
SPAC20G8.09c Not deleted 2 Henry Levin
SPAC222.04c ies6 Not deleted 2 Henry Levin
SPAC222.12c atp2 Not deleted 2 Henry Levin
SPAC222.12c atp2 Could not be revived Henry Levin Replaced by Bioneer
SPAC22F8.11 plc1 Not deleted 2 Henry Levin
SPAC23C4.09c Could not be revived Henry Levin Replaced by Bioneer
SPAC23C4.11 atp18 Could not be revived Henry Levin Replaced by Bioneer
SPAC31G5.07 Could not be revived Henry Levin Replaced by Bioneer
SPAC3G9.08 png1 Could not be revived Henry Levin Replaced by Bioneer
SPAC4A8.03c ptc4 Could not be revived Henry Levin Replaced by Bioneer
SPAC4F8.03 Could not be revived Henry Levin Replaced by Bioneer
SPAC56F8.04c coq2 Could not be revived Henry Levin Replaced by Bioneer
SPAC589.11 mug82 Could not be revived Henry Levin Replaced by Bioneer
SPAC637.07 moe1 Could not be revived Henry Levin Replaced by Bioneer
SPAC644.07 Could not be revived Henry Levin Replaced by Bioneer
SPAC664.13 Not deleted 2 Henry Levin
SPAC6C3.04 cit1 Not deleted 2 Henry Levin
SPAC6F6.03c Not deleted 2 Henry Levin
SPAC824.07 Could not be revived Henry Levin Replaced by Bioneer
SPAC890.07c rmt1 Could not be revived Henry Levin Replaced by Bioneer
SPAC8C9.03 cgs1 Could not be revived Henry Levin Replaced by Bioneer
SPAC926.09c fas1 Not deleted 2 Henry Levin
SPAP27G11.10c nup184 Not deleted 2 Henry Levin
SPBC119.06 sco1 Could not be revived Henry Levin Replaced by Bioneer
SPBC13E7.04 atp16 Not deleted 2 Henry Levin
SPBC146.09c lsd1 Not deleted 2 Henry Levin
SPBC16C6.02c vps1302 Could not be revived Henry Levin Replaced by Bioneer
SPBC16D10.02 trm11 Could not be revived Henry Levin Replaced by Bioneer
SPBC16H5.03c fub2 Could not be revived Henry Levin Replaced by Bioneer
SPBC17G9.02c Could not be revived Henry Levin Replaced by Bioneer
SPBC17G9.09 tif213 Not deleted 2 Henry Levin
SPBC18E5.04, rpl1001 Could not be revived Henry Levin Replaced by Bioneer
SPBC18H10.02 lcf1 Could not be revived Henry Levin Replaced by Bioneer
SPBC19C2.14 smd3 Not deleted 2 Henry Levin
SPBC19G7.02 Could not be revived Henry Levin Replaced by Bioneer
SPBC21D10.11c nfs1 Not deleted 2 Henry Levin
SPBC26H8.12 Could not be revived Henry Levin Replaced by Bioneer
SPBC29A3.18 cyt1 Could not be revived Henry Levin Replaced by Bioneer
SPBC30D10.13c pdb1 Not deleted 2 Henry Levin
SPBC32F12.06 pch1 Could not be revived Henry Levin Replaced by Bioneer
SPBC36B7.03 sec63 Not deleted 2 Henry Levin
SPBC405.04c ypt7 Not deleted 2 Henry Levin
SPBC409.03 swi5 Not deleted 2 Henry Levin
SPBC409.07c wis1 Not deleted 2 Henry Levin
SPBC530.01 gyp1 Could not be revived Henry Levin Replaced by Bioneer
SPBC577.06c Not deleted 2 Henry Levin
SPBP23A10.10 ppk32 Could not be revived Henry Levin Replaced by Bioneer
SPCC162.01c Not deleted 2 Henry Levin
SPCC1682.16 rpt4 Not deleted 2 Henry Levin
SPCC1840.02c bgs4 Not deleted 2 Henry Levin
SPCC1919.03c Could not be revived Henry Levin Replaced by Bioneer
SPCC1919.09 tif6 Not deleted 2 Henry Levin
SPCC285.09c cgs2 Could not be revived Henry Levin Replaced by Bioneer
SPCC297.03 ssp1 Could not be revived Henry Levin Replaced by Bioneer
SPCC306.04c set1 Could not be revived Henry Levin Replaced by Bioneer
SPCC31H12.08c ccr4 Could not be revived Henry Levin Replaced by Bioneer
SPCC4B3.12 set9 Not deleted 2 Henry Levin
SPCC553.08c Could not be revived Henry Levin Replaced by Bioneer
SPCC63.02c, aah3 Could not be revived Henry Levin Replaced by Bioneer
SPCC663.01c ekc1 Not deleted 2 Henry Levin


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